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Upgraded genome with ultra-long Nanopore reads facilitates resistance-gene discovery in sugarcane

doi: 10.1016/j.jgg.2026.07.012
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This work was funded by the Chinese Academy of Tropical Agricultural Sciences for Science and Technology Innovation Team of National Tropical Agricultural Science Center (CATASCXTD202402), Guangxi Science and Technology Project (Agricultural and Rural Field) (GUIKENONG AB24153001), Project of State Key Laboratory of Tropical Crop Breeding (SKLTCBYWF202503, NKLTCBCXTD24 and NKLTCBCXTD38), and China Agriculture Research System of MOF and MARA (CARS-17).

  • Received Date: 2026-02-20
  • Accepted Date: 2026-07-29
  • Rev Recd Date: 2026-07-29
  • Available Online: 2026-08-06
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  • Bao, Y., Zhang, Q., Huang, J., Zhang, S., Yao, W., Yu, Z., Deng, Z., Yu, J., Kong, W., Yu, X., et al., 2024. A chromosomal-scale genome assembly of modern cultivated hybrid sugarcane provides insights into origination and evolution. Nat. Commun. 15, 3041.
    Garsmeur, O., Rio, S., Pompidor, N., Lipzen, A., Hervouet, C., Durand, T., Daum, C., Yoshinaga, Y., Butterfield, M., Sanchez, A., et al., 2025. The genomic footprints of wild Saccharum species trace domestication, diversification, and modern breeding of sugarcane. Cell 188, 7252-7266.e15.
    Healey, A.L., Garsmeur, O., Lovell, J.T., Shengquiang, S., Sreedasyam, A., Jenkins, J., Plott, C.B., Piperidis, N., Pompidor, N., Llaca, V., et al., 2024. The complex polyploid genome architecture of sugarcane. Nature 628, 804-810.
    Huang, Y., Zhang, Y., Zhang, Q., Zhuang, G., Li, C., Wang, B., Gao, R., Xu, Y., Qi, Y., Hua, X., et al., 2026. Multiscale pangenome graphs empower the genomic dissection of mixed-ploidy sugarcane species. Science 391, eadx1616.
    Kumar, L., Futschik, M.E., 2007. Mfuzz: a software package for soft clustering of microarray data. Bioinformation 2, 5-7.
    Wang, J., Li, X., Wang, Y., Lin, J., Chen, S., Liu, H., Chen, X., Chai, K., Dong, A., Zhao, T., et al., 2026. Genetic architecture of sugarcane traits in a polyploid genomics framework. Nature, 654, 994-1003.
    Wang, T., Wang, B., Hua, X., Tang, H., Zhang, Z., Gao, R., Qi, Y., Zhang, Q., Wang, G., Yu, Z., et al., 2023. A complete gap-free diploid genome in Saccharum complex and the genomic footprints of evolution in the highly polyploid Saccharum genus. Nat. Plants 9, 554-571.
    Zhang, J., Qi, Y., Hua, X., Wang, Y., Wang, B., Qi, Y., Huang, Y., Yu, Z., Gao, R., Zhang, Y., et al., 2025. The highly allo-autopolyploid modern sugarcane genome and very recent allopolyploidization in Saccharum. Nat. Genet. 57, 242-253.
    Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., Zhu, F., Jones, T., Zhu, X., Bowers, J., et al., 2018. Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Nat. Genet. 50, 1565-1573.
    Zhang, Z., Wu, Q., Wang, D., Zhang, Y., Chen, F., Que, Y., 2025. Sugarcane genomics: origin, evolution, and domestication. Innov. Life 3, 100175.
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